3ZM8

Crystal structure of Podospora anserina GH26-CBM35 beta-(1,4)- mannanase


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.206

Literature

Macromolecules
Sequence Display for 3ZM8

Classification: HYDROLASE

Total Structure Weight: 53681.66

Macromolecule Entities
Molecule Chains Length Organism Details
GH26 ENDO-BETA-1,4-MANNANASE A 475 Podospora anserina EC#: 3.2.1.78 IUBMB
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
HG
Query on HG

A MERCURY (II) ION
Hg
BQPIGGFYSBELGY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
TLA
Query on TLA

A L(+)-TARTARIC ACID
C4 H6 O6
FEWJPZIEWOKRBE-JCYAYHJZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.206
  • Space Group: P 65 2 2

Unit Cell:

Length (Å) Angle (°)
a = 97.49 α = 90.00
b = 97.49 β = 90.00
c = 268.72 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-02-06
  • Released Date: 2013-04-17
  • Deposition author(s): Couturier, M., Roussel, A., Rosengren, A., Leone, P., Stalbrand, H., Berrin, J.G.

Revision History

  • Version 1_0: 2013-04-17

    Type: Initial release

  • Version 1_1: 2013-06-12

    Type: Database references