3ZBI

Fitting result in the O-layer of the subnanometer structure of the bacterial pKM101 type IV secretion system core complex digested with elastase

Structural Biology Knowledgebase: 3ZBI SBKB.org


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 8.5 Å
  • Aggregation State: Particle
  • Specimen Type: Vitreous Ice
  • Reconstruction Method: Single Particle

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3ZBI

Classification: CELL ADHESION

Total Structure Weight: 598911.73

Macromolecule Entities
Molecule Chains Length Organism Details
TRAF PROTEIN A, D, G..., J, M, P, S, V, Y, b, e, h, k, nA, D, G, J, M, P, S, V, Y, b, e, h, k, n 216 Escherichia coli Fragment: C-TERMINAL DOMAIN, RESIDUES 171-386
Mutation: A846R
Gene Name(s): traF
TRAO PROTEIN B, E, H..., K, N, Q, T, W, Z, c, f, i, l, oB, E, H, K, N, Q, T, W, Z, c, f, i, l, o 130 Escherichia coli Fragment: C-TERMINAL DOMAIN, RESIDUES 161-290
Gene Name(s): traO
TRAN PROTEIN C, F, I..., L, O, R, U, X, a, d, g, j, m, pC, F, I, L, O, R, U, X, a, d, g, j, m, p 48 Escherichia coli Gene Name(s): traN

Membrane Protein

Source: inferred by homology | Group: ALPHA-HELICAL

Subgroup Name: Outer Membrane Proteins

Protein Name: Type IV outer membrane secretion complex



Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 8.5 Å
  • Aggregation State: Particle
  • Specimen Type: Vitreous Ice
  • Reconstruction Method: Single Particle

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-11-10
  • Released Date: 2013-04-03
  • Deposition author(s): Rivera-Calzada, A., Fronzes, R., Savva, C.G., Chandran, V., Lian, P.W., Laeremans, T., Pardon, E., Steyaert, J., Remaut, H., Waksman, G., Orlova, E.V.

Revision History

  • 2013-04-24
    Type: Citation | Details: JRNL