3WD5

Crystal structure of TNFalpha in complex with Adalimumab Fab fragment

Structural Biology Knowledgebase: 3WD5 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.1 Å
  • R-Value Free: 0.275
  • R-Value Work: 0.187

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3WD5

Classification: IMMUNE SYSTEM

Total Structure Weight: 63935.91

Macromolecule Entities
Molecule Chains Length Organism Details
Tumor necrosis factor A 157 Homo sapiens Fragment: Tumor necrosis factor, soluble form
Mutation: R31D
Gene Name(s): TNF Gene View TNFA TNFSF2
Adalimumab Light Chain L 213 Homo sapiens
Adalimumab Heavy Chain H 219 Homo sapiens


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.1 Å
  • R-Value Free: 0.275
  • R-Value Work: 0.187
  • Space Group: I 21 3
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 161.85 α = 90.00
b = 161.85 β = 90.00
c = 161.85 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-06-06
  • Released Date: 2013-08-14
  • Deposition author(s): Hu, S., Liang, S.Y., Guo, Y.J., Lou, Z.Y.

Revision History

  • 2015-07-01
    Type: Citation | Details: Citation update
  • 2013-08-21
    Type: Citation | Details: Citation update