3U9Z

Crystal structure between actin and a protein construct containing the first beta-thymosin domain of drosophila ciboulot (residues 2-58) with the three mutations N26D/Q27K/D28S

Structural Biology Knowledgebase: 3U9Z SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.09 Å
  • R-Value Free: 0.227
  • R-Value Work: 0.160

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3U9Z

Classification: CONTRACTILE PROTEIN PROTEIN BINDING

Total Structure Weight: 48573.66

Macromolecule Entities
Molecule Chains Length Organism Details
Actin, alpha skeletal muscle A 375 Oryctolagus cuniculus Gene Name(s): ACTA1 Gene View ACTA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Ciboulot, isoform A C 58 Drosophila melanogaster Fragment: UNP residues 2-58
Mutation: N26D, Q27K, D28S
Gene Name(s): cib EG:EG0007.11 CG4944 Dmel_CG4944
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ADP
Query on ADP

A ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.09 Å
  • R-Value Free: 0.227
  • R-Value Work: 0.160
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 45.79 α = 90.00
b = 75.18 β = 90.00
c = 117.71 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-10-20
  • Released Date: 2012-01-25
  • Deposition author(s): Renault, L., Husson, C., Carlier, M.F., Didry, D.

Revision History

  • 2013-06-26
    Type: Citation | Details: Citation update