3TY4

Crystal structure of homoisocitrate dehydrogenase from Schizosaccharomyces pombe

Structural Biology Knowledgebase: 3TY4 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.215
  • R-Value Work: 0.188

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3TY4

Classification: OXIDOREDUCTASE

Total Structure Weight: 80206.74

Macromolecule Entities
Molecule Chains Length Organism Details
Probable homoisocitrate dehydrogenase A, B 366 Schizosaccharomyces pombe EC#: 1.1.1.87 IUBMB
Gene Name(s): lys12 SPAC31G5.04

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A, B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.215
  • R-Value Work: 0.188
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 52.85 α = 90.00
b = 94.45 β = 106.63
c = 76.08 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-09-23
  • Released Date: 2011-11-09
  • Deposition author(s): Bulfer, S.L., Hendershot, J.M., Trievel, R.C.

Revision History

  • 2013-11-27
    Type: Citation | Details: Citation update
  • 2011-12-14
    Type: Citation | Details: Citation update