Download MendeleyCrystal structure of Indole-3-glycerol phosphate synthase from Brucella melitensis
Gardberg, A., Edwards, T., Sankaran, B., Staker, B., Stewart, L.To be published.
3TSM
Crystal structure of Indole-3-glycerol phosphate synthase from Brucella melitensis
- PDB DOI: https://doi.org/10.2210/pdb3TSM/pdb
- Classification: LYASE
- Organism(s): Brucella abortus 2308
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2011-09-13 Released: 2011-10-05
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.15 Å
- R-Value Free: 0.228
- R-Value Work: 0.183
- R-Value Observed: 0.185
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Indole-3-glycerol phosphate synthase | 272 | Brucella abortus 2308 | Mutation(s): 0 Gene Names: trpC, BAB1_1164 EC: 4.1.1.48 |  | |
UniProt | |||||
Find proteins for Q2YRR4 (Brucella abortus (strain 2308)) Explore Q2YRR4 Go to UniProtKB: Q2YRR4 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q2YRR4 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SO4 Query on SO4 | E [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
| GOL Query on GOL | C [auth A], D [auth B], G [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
| UNL Query on UNL | F [auth B] | Unknown ligand PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.15 Å
- R-Value Free: 0.228
- R-Value Work: 0.183
- R-Value Observed: 0.185
- Space Group: P 21 21 21
- Diffraction Data: https://doi.org/10.18430/M33TSM
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 71.8 | α = 90 |
| b = 73.29 | β = 90 |
| c = 118.94 | γ = 90 |
| Software Name | Purpose |
|---|---|
| XSCALE | data scaling |
| PHASER | phasing |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| ADSC | data collection |
| XDS | data reduction |
Entry History
Deposition Data
- Released Date: 2011-10-05 Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Revision History (Full details and data files)
- Version 1.0: 2011-10-05
Type: Initial release - Version 1.1: 2023-09-13
Changes: Data collection, Database references, Derived calculations, Refinement description
