3R6W

paAzoR1 binding to nitrofurazone

Structural Biology Knowledgebase: 3R6W SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.09 Å
  • R-Value Free: 0.204
  • R-Value Work: 0.161

Literature

Macromolecules
Sequence Display for 3R6W

Classification: OXIDOREDUCTASE

Total Structure Weight: 48204.20

Macromolecule Entities
Molecule Chains Length Organism Details
FMN-dependent NADH-azoreductase 1 A, B 212 Pseudomonas aeruginosa EC#: 1.7 IUBMB
Gene Name(s): azoR1 PA0785
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FMN
Query on FMN

A, B FLAVIN MONONUCLEOTIDE
RIBOFLAVIN MONOPHOSPHATE (Synonym)
C17 H21 N4 O9 P
FVTCRASFADXXNN-SCRDCRAPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NFZ
Query on NFZ

A NITROFURAZONE
5-NITRO-2-FURALDEHYDE SEMICARBAZONE (Synonym)
C6 H6 N4 O4
IAIWVQXQOWNYOU-FPYGCLRLSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A, B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.09 Å
  • R-Value Free: 0.204
  • R-Value Work: 0.161
  • Space Group: P 31 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 82.20 α = 90.00
b = 82.20 β = 90.00
c = 108.46 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-03-22
  • Released Date: 2011-08-24
  • Deposition author(s): Ryan, A., Kaplan, K., Laurieri, N., Lowe, E., Sim, E.

Revision History

  • 2012-03-07
    Type: Citation | Details: Citation update