3QXD

F54C HLA-DR1 bound with CLIP peptide

Structural Biology Knowledgebase: 3QXD SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.221
  • R-Value Work: 0.189

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3QXD

Classification: IMMUNE SYSTEM

Total Structure Weight: 89738.02

Macromolecule Entities
Molecule Chains Length Organism Details
HLA class II histocompatibility antigen, DR alpha chain A, D 182 Homo sapiens Fragment: UNP residues 26-207
Mutation: F54C
Gene Name(s): HLA-DRA Gene View HLA-DRA1
HLA class II histocompatibility antigen, DRB1-1 beta chain B, E 190 Homo sapiens Fragment: UNP residues 30-219
Gene Name(s): HLA-DRB1 Gene View
HLA class II histocompatibility antigen gamma chain peptide C, F 15 Homo sapiens Fragment: CLIP region
Gene Name(s): CD74 Gene View DHLAG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.221
  • R-Value Work: 0.189
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 65.00 α = 90.00
b = 94.87 β = 90.00
c = 154.09 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-03-01
  • Released Date: 2011-11-16
  • Deposition author(s): Painter, C.A., Stern, L.J.

Revision History

  • 2011-12-14
    Type: Citation | Details: Citation update
  • 2011-11-30
    Type: Citation | Details: Citation update