3PFF

Truncated human atp-citrate lyase with ADP and tartrate bound

Structural Biology Knowledgebase: 3PFF SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.228
  • R-Value Work: 0.168

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3PFF

Classification: TRANSFERASE

Total Structure Weight: 91438.40

Macromolecule Entities
Molecule Chains Length Organism Details
ATP-citrate synthase A 829 Homo sapiens EC#: 2.3.3.8 IUBMB
Fragment: unp residues 1-817
Gene Name(s): ACLY Gene View

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ADP
Query on ADP

A ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
TLA
Query on TLA

A L(+)-TARTARIC ACID
C4 H6 O6
FEWJPZIEWOKRBE-JCYAYHJZSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.228
  • R-Value Work: 0.168
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 167.54 α = 90.00
b = 61.70 β = 125.47
c = 107.98 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-10-28
  • Released Date: 2011-10-12
  • Deposition author(s): Fraser, M.E., Sun, T.

Revision History

  • 2012-04-11
    Type: Citation | Details: Citation update