3OVP

Crystal Structure of hRPE

Structural Biology Knowledgebase: 3OVP SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.174
  • R-Value Work: 0.147

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3OVP

Classification: Isomerase

Total Structure Weight: 52772.66

Macromolecule Entities
Molecule Chains Length Organism Details
Ribulose-phosphate 3-epimerase A, B 228 Homo sapiens EC#: 5.1.3.1 IUBMB
Gene Name(s): RPE Gene View HUSSY-17
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
XPE
Query on XPE

A, B 3,6,9,12,15,18,21,24,27-NONAOXANONACOSANE- 1,29-DIOL
DECAETHYLENE GLYCOL (Synonym)
C20 H42 O11
DTPCFIHYWYONMD-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
FE2
Query on FE2

A, B FE (II) ION
Fe
CWYNVVGOOAEACU-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.174
  • R-Value Work: 0.147
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 63.77 α = 90.00
b = 46.76 β = 89.97
c = 73.31 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-09-16
  • Released Date: 2011-03-09
  • Deposition author(s): Liang, W.G., Ouyang, S.Y., Shaw, N., Joachimiak, A., Zhang, R.G., Liu, Z.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4