3MWD

Truncated Human ATP-Citrate Lyase with Citrate Bound

Structural Biology Knowledgebase: 3MWD SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.191

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3MWD

Classification: TRANSFERASE

Total Structure Weight: 84407.62

Macromolecule Entities
Molecule Chains Length Organism Details
ATP-citrate synthase A 425 Homo sapiens EC#: 2.3.3.8 IUBMB
Fragment: Truncated Human ATP-Citrate Lyase (UNP residues 1-425)
Gene Name(s): ACLY Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
ATP-citrate synthase B 334 Homo sapiens EC#: 2.3.3.8 IUBMB
Fragment: Truncated Human ATP-Citrate Lyase (UNP residues 487-820)
Gene Name(s): ACLY Gene View

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CIT
Query on CIT

A CITRIC ACID
C6 H8 O7
KRKNYBCHXYNGOX-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
CIT Ki: 18000 nM (97) BindingDB

N/A in BindingMoad
N/A in PDBbind
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.191
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 169.20 α = 90.00
b = 61.70 β = 125.00
c = 109.42 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-05-05
  • Released Date: 2010-06-16
  • Deposition author(s): Fraser, M.E., Sun, T.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4