3HVQ

Crystal structure of a complex between Protein Phosphatase 1 alpha (PP1) and the PP1 binding and PDZ domains of Neurabin

Structural Biology Knowledgebase: 3HVQ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.221
  • R-Value Work: 0.161

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3HVQ

Classification: HYDROLASE / HYDROLASE REGULATOR

Total Structure Weight: 113086.27

Macromolecule Entities
Molecule Chains Length Organism Details
Serine/threonine-protein phosphatase PP1-alpha catalytic subunit A, B 329 Homo sapiens EC#: 3.1.3.16 IUBMB
Fragment: CATALYTIC SUBUNIT
Gene Name(s): PPP1CA Gene View PPP1A
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Neurabin-1 C, D 170 Rattus norvegicus Fragment: PP1 BINDING AND PDZ DOMAINS
Gene Name(s): Ppp1r9a
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PO4
Query on PO4

A, B PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MN
Query on MN

A, B MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.221
  • R-Value Work: 0.161
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 120.86 α = 90.00
b = 83.65 β = 93.59
c = 108.80 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-06-16
  • Released Date: 2010-03-23
  • Deposition author(s): Critton, D.A., Ragusa, M.J., Page, R., Peti, W.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor