3GZU

VP7 recoated rotavirus DLP

Structural Biology Knowledgebase: 3GZU SBKB.org


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.8 Å
  • Aggregation State: Particle
  • Specimen Type: Vitreous Ice (cryo Em)
  • Reconstruction Method: Single Particle

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3GZU

Classification: VIRUS [ VIPERdb ]

Total Structure Weight: 770024.62

Macromolecule Entities
Molecule Chains Length Organism Details
Inner capsid protein VP2 A, B 800 Rotavirus a Fragment: VP2
Gene Name(s):
Intermediate capsid protein VP6 C, D, E..., F, G, H, I, J, K, L, M, N, OC, D, E, F, G, H, I, J, K, L, M, N, O 397 Rotavirus a Fragment: VP6
Gene Name(s):

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

C, G, J, N, O ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.8 Å
  • Aggregation State: Particle
  • Specimen Type: Vitreous Ice (cryo Em)
  • Reconstruction Method: Single Particle

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-04-07
  • Released Date: 2009-07-14
  • Deposition author(s): Chen, J.Z., Settembre, E.C., Harrison, S.C., Grigorieff, N.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4