3CJB

Actin dimer cross-linked by V. cholerae MARTX toxin and complexed with Gelsolin-segment 1

Structural Biology Knowledgebase: 3CJB SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.21 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.245

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3CJB

Classification: STRUCTURAL PROTEIN

Total Structure Weight: 56756.60

Macromolecule Entities
Molecule Chains Length Organism Details
Actin, alpha skeletal muscle A 377 Oryctolagus cuniculus Gene Name(s): ACTA1 Gene View ACTA
Gelsolin G 125 Homo sapiens Fragment: segment 1
Gene Name(s): GSN Gene View

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ATP
Query on ATP

A ADENOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O13 P3
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A, G CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.21 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.245
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 56.70 α = 90.00
b = 69.54 β = 90.00
c = 182.11 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-03-12
  • Released Date: 2008-03-25
  • Deposition author(s): Sawaya, M.R., Kudryashov, D.S., Pashkov, I., Reisler, E., Yeates, T.O.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor