3CCW

Thermodynamic and structure guided design of statin hmg-coa reductase inhibitors


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.217

Literature

Macromolecules
Sequence Display for 3CCW

Classification: OXIDOREDUCTASE

Total Structure Weight: 191908.44

Macromolecule Entities
Molecule Chains Length Organism Details
3-hydroxy-3-methylglutaryl-coenzyme A reductase A, B, C, D 441 Homo sapiens EC#: 1.1.1.34 IUBMB
Fragment: CATALYTIC DOMAIN (RESIDUES 441-875)
Mutation: M485I
Gene Name(s): HMGCR Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
4HI
Query on 4HI

B, C, D (3R,5R)-7-[4-(benzylcarbamoyl)-2-(4-fluorophenyl)- 5-(1-methylethyl)-1H-imidazol-1-yl]-3,5-dihydroxyheptanoic acid
C27 H32 F N3 O5
ATGOOVTXNDYCBK-FGZHOGPDSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
4HI ΔG: -49.3 - -41.8 kJ/mol (99) BindingDB
-TΔS: -13 - 28 kJ/mol (99) BindingDB

Kd: 13.5 nM  BindingMOAD
Kd: 13.5 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.217
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 73.93 α = 90.00
b = 174.38 β = 118.83
c = 76.08 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-02-26
  • Released Date: 2008-06-17
  • Deposition author(s): Pavlovsky, A., Sarver, R.W., Harris, M.S., Finzel, B.C.

Revision History

  • Version 1_0: 2008-06-17

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance