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Crystal structure of zebrafish prostacyclin synthase (cytochrome P450 8A1)
 
 
DOI:10.2210/pdb3b98/pdb
3B98
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: Isomerase
    Structure Weight: 110932.20
     
    Molecule:Prostaglandin I2 synthase
    Polymer:1Type:polypeptide(L)Length:475
    Chains:A, B
    EC#:5.3.99.4 Go to IUBMB EC entry  
    Fragment:UNP residues 17-480
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Danio rerio Go to NCBI Taxonomy entry Common Name: Zebrafish Expression System: Escherichia coli bl21(de3)  
     
     
  •  
    Move Section Related PDB Entries Hide
    Id Details
    3B6H  The ligand form of the same protein from human 
    3B99  The ligand form of the same protein 
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    HEM     PROTOPORPHYRIN IX CONTAINING FE C34 H32 Fe N4 O4 3DLigand Explorer Link out to Ligand Expos:HEM Link out to SuperLigands:HEM Link out to SuperHapten:HEM
     
     
  •  
    Move Section Derived Data Hide
     
     
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< Biological Assembly 1    Help >
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Biological assembly 1 assigned by authors and generated by PISA (software)
 
 
 
  •  
    Move Section Deposition Summary Hide
    Authors:   Li, Y.-C.,   Chiang, C.-W.,   Yeh, H.-C.,   Hsu, P.-Y.,   Whitby, F.G.,   Wang, L.-H.,   Chan, N.-L.

    Deposition:   2007-11-03
    Release:   2007-11-20
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   Download Structure Factors  [ EDS External Link to EDS ]
    View a histogram of Resolution Resolution[Å]: 2.08
    R-Value: 0.229 (obs.)
    R-Free: 0.264
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 58.67 α = 90.00 
    b = 87.90 β = 90.00 
    c = 190.85 γ = 90.00