3AU8

Crystal structure of the ternary complex of an isomerase


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.86 Å
  • R-Value Free: 0.246
  • R-Value Work: 0.200

Literature

Macromolecules
Sequence Display for 3AU8

Classification: ISOMERASE

Total Structure Weight: 113259.94

Macromolecule Entities
Molecule Chains Length Organism Details
1-deoxy-D-xylulose 5-phosphate reductoisomerase A, B 488 Plasmodium falciparum EC#: 1.1.1.267 IUBMB
Gene Name(s): DXR
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NDP
Query on NDP

A, B NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
C21 H30 N7 O17 P3
ACFIXJIJDZMPPO-NNYOXOHSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MN
Query on MN

A, B MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.86 Å
  • R-Value Free: 0.246
  • R-Value Work: 0.200
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 168.38 α = 90.00
b = 58.53 β = 117.74
c = 86.07 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-02-01
  • Released Date: 2011-08-10
  • Deposition author(s): Umeda, T., Tanaka, N., Kusakabe, Y., Nakanishi, M., Kitade, Y., Nakamura, K.T.

Revision History

  • 2013-06-12
    Type: Database references