3A3J

Crystal structures of penicillin binding protein 5 from Haemophilus influenzae

Structural Biology Knowledgebase: 3A3J SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.208

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3A3J

Classification: HYDROLASE

Total Structure Weight: 38086.39

Macromolecule Entities
Molecule Chains Length Organism Details
PBP5 A 344 Haemophilus influenzae EC#: 3.4.16.4 IUBMB
Gene Name(s): dacA HI_0029
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.208
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 41.12 α = 90.00
b = 52.69 β = 90.00
c = 201.49 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-06-12
  • Released Date: 2009-12-22
  • Deposition author(s): Kawai, F., Roper, D.I., Park, S.-Y., Tame, J.R.H.

Revision History

  • 2013-11-20
    Type: Citation | Details: Citation update
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4