Structure of BsUDG-p56 complex
3ZOQ
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase/viral Protein
    Structure Weight: 39354.19
    Molecule: URACIL-DNA GLYCOSYLASE
    Polymer: 1 Type: protein Length: 225
    Chains: A
    EC#: 3.2.2.27   
    Organism: Bacillus subtilis subsp. subtilis str. 168
    Gene Names: ung ywdG BSU37970 ipa-57d
    UniProtKB: Protein Feature View | Search PDB | P39615  
    Molecule: P56
    Polymer: 2 Type: protein Length: 56
    Chains: B, C
    Organism: Bacillus phage phi29
    Gene Name: 0.8
    UniProtKB: Protein Feature View | Search PDB | Q38503  
     
  •   Structure Validation Hide

    View the full validation report  

     

  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Bacillus subtilis subsp. subtilis str. 168   Taxonomy   Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Bacillus phage phi29   Taxonomy   Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    3ZOR   STRUCTURE OF BSUDG 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    CL
    Search 
    Download 
    CL Cl
    CHLORIDE ION
    GOL
    Search 
    Download 
    GOL C3 H8 O3
    GLYCEROL
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
Downloadable viewers:
 
 
 
  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Banos-Sanz, J.I.,  Mojardin, L.,  Sanz-Aparicio, J.,  Gonzalez, B.,  Salas, M.

    Deposition:   2013-02-22
    Release:   2013-05-22
    Last Modified (REVDAT):   2013-07-31
     
  •   Revision History    Hide
    Mouse over text for details
    2013-07-31
    Atom nomenclature
    2013-07-31
    Citation
    2013-05-29
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    Resolution[Å]:   1.45
    R-Value: 0.141 (obs.)
    R-Free: 0.182
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 53.77 α = 90.00 
    b = 66.27 β = 90.00 
    c = 102.28 γ = 90.00