Crystal structure of Bcl-xL in complex with inhibitor (Compound 2).
3ZK6
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Apoptosis
    Structure Weight: 42715.84
    Molecule: BCL-2-LIKE PROTEIN 1
    Polymer: 1 Type: protein Length: 181
    Chains: A, B
    Fragment: RESIDUES 1-40 AND 81-209
    Details: DELETION MUTATION PERFORMED. TRUNCATION REMOVES RESIDUES 41-80, AND 210-233
    Organism: Homo sapiens
    Gene Names: Gene View for BCL2L1 BCL2L BCLX
    UniProtKB: Protein Feature View | Search PDB | Q07817  
     
  •   Structure Validation Hide

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  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    3ZLN   CRYSTAL STRUCTURE OF BCL-XL IN COMPLEX WITH INHIBITOR (COMPOUND 3). 
    3ZLO   CRYSTAL STRUCTURE OF BCL-XL IN COMPLEX WITH INHIBITOR (COMPOUND 6). 
    3ZLR   CRYSTAL STRUCTURE OF BCL-XL IN COMPLEX WITH INHIBITOR (WEHI-539). 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    H1I
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    H1I C31 H30 N4 O4 S2
    N-(3-(5-(1-(2-(benzo[d]thiazol-2-yl)hydrazono)ethyl)furan- 2-yl)phenylsulfonyl)-6-phenylhexanamide
    H1I:3ZK6
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    H1I
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    H1I
    N/Ain BindingDB
    Kd: 460 nM - data from BindingMOAD  
    N/Ain PDBbind
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Czabotar, P.E.,  Lessene, G.L.,  Smith, B.J.,  Colman, P.M.

    Deposition:   2013-01-22
    Release:   2013-04-24
    Last Modified (REVDAT):   2013-06-05
     
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    2013-06-05
    Citation
    2013-05-08
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.48
    R-Value: 0.221 (obs.)
    R-Free: 0.261
    Space Group: P 41
    Unit Cell:
      Length [Å] Angles [°]
    a = 65.20 α = 90.00 
    b = 65.20 β = 90.00 
    c = 117.21 γ = 90.00