3ZE5

Crystal structure of the integral membrane diacylglycerol kinase - delta4

Structural Biology Knowledgebase: 3ZE5 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.1 Å
  • R-Value Free: 0.258
  • R-Value Work: 0.232

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3ZE5

Classification: TRANSFERASE

Total Structure Weight: 42721.94

Macromolecule Entities
Molecule Chains Length Organism Details
DIACYLGLYCEROL KINASE A, B, C 130 Escherichia coli EC#: 2.7.1.107 IUBMB
Mutation: I53C, I70L, M96L, V107D
Gene Name(s): dgkA b4042 JW4002
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: mpstruc | Group: ALPHA-HELICAL

Subgroup Name: Phosphotransferases

Protein Name: DgkA diacylglycerol kinase (DAGK)



Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.1 Å
  • R-Value Free: 0.258
  • R-Value Work: 0.232
  • Space Group: P 31 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 72.74 α = 90.00
b = 72.74 β = 90.00
c = 198.99 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-12-03
  • Released Date: 2013-05-22
  • Deposition author(s): Li, D., Vogeley, L., Pye, V.E., Lyons, J.A., Aragao, D., Caffrey, M.

Revision History

  • 2013-06-05
    Type: Citation | Details: JRNL
  • 2013-05-29
    Type: Citation | Details: JRNL