3ZDQ

STRUCTURE OF THE HUMAN MITOCHONDRIAL ABC TRANSPORTER, ABCB10 (NUCLEOTIDE-FREE FORM)

Structural Biology Knowledgebase: 3ZDQ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • R-Value Free: 0.244
  • R-Value Work: 0.202

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3ZDQ

Classification: HYDROLASE

Total Structure Weight: 69352.39

Macromolecule Entities
Molecule Chains Length Organism Details
ATP-BINDING CASSETTE SUB-FAMILY B MEMBER 10, MITOCHONDRIAL A 595 Homo sapiens EC#: 3.6.3.43 IUBMB
Fragment: ABC TRANSPORTER, RESIDUES 152-738
Gene Name(s): ABCB10 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: inferred by homology | Group: ALPHA-HELICAL

Subgroup Name: ATP Binding Cassette (ABC) Transporters

Protein Name: ABCB10 Mitochondrial ABC transporter with bound AMPPC


Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CDL
Query on CDL

A CARDIOLIPIN
3'-SN-GLYCEROL, (Synonym)
C81 H156 O17 P2
XVTUQDWPJJBEHJ-KZCWQMDCSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
LMT
Query on LMT

A DODECYL-BETA-D-MALTOSIDE
C24 H46 O11
NLEBIOOXCVAHBD-QKMCSOCLSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GLY
Query on GLY

A GLYCINE
C2 H5 N O2
DHMQDGOQFOQNFH-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • R-Value Free: 0.244
  • R-Value Work: 0.202
  • Space Group: P 31 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 177.79 α = 90.00
b = 177.79 β = 90.00
c = 50.06 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-11-30
  • Released Date: 2013-01-23
  • Deposition author(s): Pike, A.C.W., Shintre, C.A., Krojer, T., Von Delft, F., Vollmar, M., Mukhopadhyay, S., Burgess-Brown, N., Arrowsmith, C.H., Bountra, C., Edwards, A.M., Carpenter, E.P.

Revision History

  • 2015-03-25
    Type: Citation | Details: JRNL
  • 2013-06-26
    Type: Citation | Details: JRNL
  • 2013-06-12
    Type: Citation | Details: JRNL
  • 2013-06-05
    Type: Citation | Details: JRNL