3WXV

Crystal structure of the human adiponectin receptor 1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.300
  • R-Value Work: 0.239

Literature

Macromolecules
Sequence Display for 3WXV

Classification: MEMBRANE PROTEIN / IMMUNE SYSTEM

Total Structure Weight: 59914.70

Macromolecule Entities
Molecule Chains Length Organism Details
Adiponectin receptor protein 1 A 305 Homo sapiens Fragment: UNP residues 89-375
Gene Name(s): ADIPOR1 Gene View PAQR1 TESBP1A CGI-45
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
V region heavy chain H 119 Mus musculus
V region light chain L 107 Mus musculus

Membrane Protein

Source: mpstruc | Group: ALPHA-HELICAL

Subgroup Name: Adiponectin Receptors

Protein Name: AdipoR1 adiponectin 1 receptor in complex with an Fv fragment


Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.300
  • R-Value Work: 0.239
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 92.31 α = 90.00
b = 194.11 β = 90.00
c = 74.33 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-08-11
  • Released Date: 2015-04-15
  • Deposition author(s): Tanabe, H., Fujii, Y., Nakamura, Y., Hosaka, T., Okada-Iwabu, M., Iwabu, M., Kimura-Someya, T., Shirouzu, M., Yamauchi, T., Kadowaki, T., Yokoyama, S.

Revision History

  • 2015-04-22
    Type: Database references