3WO5

Crystal structure of S147Q of Rv2613c from Mycobacterium tuberculosis


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.79 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.175

Literature

Macromolecules
Sequence Display for 3WO5

Classification: TRANSFERASE

Total Structure Weight: 50333.53

Macromolecule Entities
Molecule Chains Length Organism Details
AP-4-A phosphorylase A, B 218 Mycobacterium tuberculosis EC#: 2.7.7.53 IUBMB
Mutation: S147Q
Gene Name(s): Rv2613c
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PG4
Query on PG4

A, B TETRAETHYLENE GLYCOL
C8 H18 O5
UWHCKJMYHZGTIT-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PO4
Query on PO4

A, B PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.79 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.175
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 101.01 α = 90.00
b = 63.55 β = 111.01
c = 79.03 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-12-20
  • Released Date: 2014-12-24
  • Deposition author(s): Mori, S., Wachino, J., Arakawa, Y., Shibayama, K.

Revision History

No revisions since initial release