Role of Ser-147 and Ala-149 in catalytic activity of diadenosine tetraphosphate phosphorylase from Mycobacterium tuberculosis H37Rv
Mori, S., Wachino, J., Kim, H., Rimbara, E., Arakawa, Y., Shibayama, K.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
AP-4-A phosphorylase | 218 | Mycobacterium tuberculosis | Mutation(s): 1  Gene Names: MT2688, Rv2613c EC: 2.7.7.53 | ||
UniProt | |||||
Find proteins for P9WMK9 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore P9WMK9  Go to UniProtKB:  P9WMK9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P9WMK9 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PG4 Query on PG4 | D [auth A], G [auth B] | TETRAETHYLENE GLYCOL C8 H18 O5 UWHCKJMYHZGTIT-UHFFFAOYSA-N | |||
PO4 Query on PO4 | C [auth A], E [auth B], F [auth B] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K | |||
GOL Query on GOL | H [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 101.015 | α = 90 |
b = 63.55 | β = 111.01 |
c = 79.025 | γ = 90 |
Software Name | Purpose |
---|---|
HKL-2000 | data collection |
PHENIX | model building |
PHENIX | refinement |
HKL-2000 | data reduction |
SCALEPACK | data scaling |
PHENIX | phasing |