3WEF

Crystal structure of the human squalene synthase in complex with farnesyl thiopyrophosphate


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.190

Literature

Macromolecules
Sequence Display for 3WEF

Classification: TRANSFERASE

Total Structure Weight: 239880.95

Macromolecule Entities
Molecule Chains Length Organism Details
Squalene synthase A, B, C..., D, E, FA, B, C, D, E, F 343 Homo sapiens EC#: 2.5.1.21 IUBMB
Fragment: UNP residues 31-370
Gene Name(s): FDFT1 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FPS
Query on FPS

A, B, C, D, E S-[(2E,6E)-3,7,11-TRIMETHYLDODECA-2,6,10- TRIENYL] TRIHYDROGEN THIODIPHOSPHATE
FARNESYL THIOPYROPHOSPHATE (Synonym)
C15 H28 O6 P2 S
MYMLCRQRXFRQGP-YFVJMOTDSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.190
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 85.89 α = 90.00
b = 153.75 β = 91.06
c = 91.61 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-07-07
  • Released Date: 2014-02-12
  • Deposition author(s): Liu, C.I., Jeng, W.Y., Wang, A.H.J.

Revision History

  • Version 1_0: 2014-02-12

    Type: Initial release