3VPX

Crystal structure of leucine dehydrogenase from a psychrophilic bacterium Sporosarcina psychrophila.

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.55 Å
  • R-Value Free: 0.290 
  • R-Value Work: 0.243 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history. 


Literature

A psychrophilic leucine dehydrogenase from Sporosarcina psychrophila: Purification, characterization, gene sequencing and crystal structure analysis

Zhao, Y., Wakamatsu, T., Doi, K., Sakuraba, H., Ohshima, T.

(2012) J Mol Catal B Enzym 83: 65-72


Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Leucine dehydrogenase
A, B
364Sporosarcina psychrophilaMutation(s): 0 
EC: 1.4.1.9
UniProt
Find proteins for I0IJU1 (Sporosarcina psychrophila)
Explore I0IJU1 
Go to UniProtKB:  I0IJU1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupI0IJU1
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.55 Å
  • R-Value Free: 0.290 
  • R-Value Work: 0.243 
  • Space Group: I 4
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 135.589α = 90
b = 135.589β = 90
c = 123.553γ = 90
Software Package:
Software NamePurpose
HKL-2000data collection
MOLREPphasing
CNSrefinement
HKL-2000data reduction
HKL-2000data scaling

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2013-02-06
    Type: Initial release
  • Version 1.1: 2023-11-08
    Changes: Data collection, Database references, Refinement description