3V5K

HLA2.1 KVAELVWFL

Structural Biology Knowledgebase: 3V5K SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.31 Å
  • R-Value Free: 0.228
  • R-Value Work: 0.185

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3V5K

Classification: IMMUNE SYSTEM

Total Structure Weight: 89770.69

Macromolecule Entities
Molecule Chains Length Organism Details
HLA class I histocompatibility antigen, A-2 alpha chain A, D 275 Homo sapiens Gene Name(s): HLA-A Gene View HLAA
Beta-2-microglobulin B, E 100 Homo sapiens Gene Name(s): B2M Gene View CDABP0092 HDCMA22P
HIV-based altered-peptide ligand KVAELVWFL C, F 9 Homo sapiens Gene Name(s): pol

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

D GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.31 Å
  • R-Value Free: 0.228
  • R-Value Work: 0.185
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 62.77 α = 90.00
b = 87.08 β = 90.04
c = 79.68 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-12-16
  • Released Date: 2012-12-19
  • Deposition author(s): Collins, E.J., Lee, H.Y.

Revision History

No revisions since initial release