3UK0

RPD_1889 protein, an extracellular ligand-binding receptor from Rhodopseudomonas palustris.

Structural Biology Knowledgebase: 3UK0 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.49 Å
  • R-Value Free: 0.194
  • R-Value Work: 0.136

Literature

Macromolecules
Sequence Display for 3UK0

Classification: TRANSPORT PROTEIN

Total Structure Weight: 39827.20

Macromolecule Entities
Molecule Chains Length Organism Details
Extracellular ligand-binding receptor A 362 Rhodopseudomonas palustris Gene Name(s): RPD_1889
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ENO
Query on ENO

A 3-(4-HYDROXY-PHENYL)PYRUVIC ACID
HPP (Synonym)
C9 H8 O4
KKADPXVIOXHVKN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 43.27 α = 90.00
b = 71.58 β = 90.00
c = 105.00 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-11-08
  • Released Date: 2011-11-23
  • Deposition author(s): Osipiuk, J., Mack, J., Zerbs, S., Collart, F., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
  • Previous versions: 3SNR

Revision History

  • 2013-09-25
    Type: Citation | Details: Citation update
  • 2013-05-15
    Type: Citation | Details: Citation update