CD38 structure-based inhibitor design using the N1-cyclic inosine 5'-diphosphate ribose template
3U4H
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase/hydrolase Inhibitor
    Structure Weight: 61875.81
    Molecule: ADP-ribosyl cyclase 1
    Polymer: 1 Type: protein Length: 262
    Chains: A, B
    EC#: 2.4.99.20    3.2.2.6   
    Fragment: extracellular domain, enzymatic domain
    Mutation: Q49T, N100D, N164D, N209D, N219D
    Organism: Homo sapiens
    Gene Name: Gene View for CD38
    UniProtKB: Protein Feature View | Search PDB | P28907  
     
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  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Pichia pastoris  
     
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    Identifier Details
    3U4I    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    C8R
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    C8R C15 H21 N5 O14 P2
    8-Amino-N1-Cyclic Inosine 5'-Diphosphoribose
    C8R:3U4H
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Liu, Q.,  Hao, Q.,  Lee, H.C.,  Graeff, R.

    Deposition:   2011-10-08
    Release:   2012-10-10
    Last Modified (REVDAT):   2013-07-24
     
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    2013-07-24
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.88
    R-Value: 0.189 (obs.)
    R-Free: 0.242
    Space Group: P 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 41.71 α = 72.85 
    b = 51.46 β = 89.13 
    c = 67.75 γ = 83.18