3TRS

The crystal structure of aspergilloglutamic peptidase from Aspergillus niger

Structural Biology Knowledgebase: 3TRS SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.239
  • R-Value Work: 0.208

Literature

Macromolecules
Sequence Display for 3TRS

Classification: HYDROLASE

Total Structure Weight: 44739.41

Macromolecule Entities
Molecule Chains Length Organism Details
Aspergillopepsin-2 light chain A, C 39 Aspergillus niger EC#: 3.4.23.19 IUBMB
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Aspergillopepsin-2 heavy chain B, D 173 Aspergillus niger EC#: 3.4.23.19 IUBMB
Gene Name(s):

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DMS
Query on DMS

A, D DIMETHYL SULFOXIDE
C2 H6 O S
IAZDPXIOMUYVGZ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.239
  • R-Value Work: 0.208
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 60.69 α = 90.00
b = 65.84 β = 90.00
c = 77.39 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-09-10
  • Released Date: 2012-08-22
  • Deposition author(s): Sasaki, H., Kubota, K., Lee, W.C., Ohtsuka, J., Kojima, M., Takahashi, K., Tanokura, M.

Revision History

No revisions since initial release