3SO9

Darunavir in Complex with a Human Immunodeficiency Virus Type 1 Protease Variant


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.87 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.216

Literature

Macromolecules
Sequence Display for 3SO9

Classification: HYDORLASE / HYDORLASE INHIBITOR

Total Structure Weight: 22089.04

Macromolecule Entities
Molecule Chains Length Organism Details
HIV-1 protease A, B 99 Human immunodeficiency virus 1 EC#: 3.4.23.16 IUBMB
Fragment: HIV-1 protease, UNP residues 1-99
Mutation: Q7K, D25N, D35E, I36V, M46L
Details: The sequence is a clinical isolate with mutations introduced.
Gene Name(s): pol
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
017
Query on 017

A (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3- YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]- 1-BENZYL-2-HYDROXYPROPYLCARBAMATE
TMC114, (Synonym)
C27 H37 N3 O7 S
CJBJHOAVZSMMDJ-HEXNFIEUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.87 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.216
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 28.90 α = 90.00
b = 66.38 β = 90.00
c = 90.84 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-06-30
  • Released Date: 2011-10-12
  • Deposition author(s): Wang, Y., Liu, Z., Brunzelle, S.J., Kovari, L.C., Kovari, I.A.

Revision History

  • Version 1_0: 2011-10-12

    Type: Initial release