3SKS

Crystal structure of a putative oligoendopeptidase F from Bacillus anthracis str. Ames

Structural Biology Knowledgebase: 3SKS SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.05 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.181

Literature

Macromolecules
Sequence Display for 3SKS

Classification: HYDROLASE

Total Structure Weight: 66902.98

Macromolecule Entities
Molecule Chains Length Organism Details
Putative Oligoendopeptidase F A 567 Bacillus anthracis Gene Name(s): pz-A GBAA_1353 AB163_09900 AB164_09745 AB165_23215 AB166_26125 AB167_11980 AB168_02495 AB169_19650 AB170_19140 AB171_21860 AB893_06880 ABW01_10635 ADT20_16805 ADT21_06625 BASH2_04505 BF27_622
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PO4
Query on PO4

A PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 63.98 α = 90.00
b = 84.55 β = 90.00
c = 116.08 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-06-23
  • Released Date: 2011-07-06
  • Deposition author(s): Wajerowicz, W., Onopriyenko, O., Porebski, P., Domagalski, M., Chruszcz, M., Savchenko, A., Anderson, W., Minor, W., Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4