3RRO

Crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase (FabG) from Vibrio cholerae

Structural Biology Knowledgebase: 3RRO SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.179
  • R-Value Work: 0.139

Literature

Macromolecules
Sequence Display for 3RRO

Classification: OXIDOREDUCTASE

Total Structure Weight: 54731.57

Macromolecule Entities
Molecule Chains Length Organism Details
3-ketoacyl-(acyl-carrier-protein) reductase A, B 251 Vibrio cholerae EC#: 1.1.1.100 IUBMB
Gene Name(s): fabG VC_2021
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 5 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PGE
Query on PGE

A, B TRIETHYLENE GLYCOL
C6 H14 O4
ZIBGPFATKBEMQZ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A, B 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

B CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 63.94 α = 90.00
b = 63.94 β = 90.00
c = 190.15 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-04-29
  • Released Date: 2011-05-18
  • Deposition author(s): Hou, J., Chruszcz, M., Cooper, D.R., Grabowski, M., Zheng, H., Osinski, T., Shumilin, I., Anderson, W., Minor, W., Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History

  • 2016-03-23
    Type: Citation | Details: Citation update
  • 2015-11-25
    Type: Citation | Details: Citation update
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4