Crystal structure of Polyphosphate Kinase 2 from Arthrobacter aurescens TC1
Nocek, B., Hatzos-Skintges, C., Feldmann, B., Babnigg, G., Joachimiak, A.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Putative polyphosphate kinase 2 family protein | 289 | Paenarthrobacter aurescens TC1 | Mutation(s): 0  Gene Names: AAur_2811 | ||
UniProt | |||||
Find proteins for A1R8G0 (Paenarthrobacter aurescens (strain TC1)) Explore A1R8G0  Go to UniProtKB:  A1R8G0 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A1R8G0 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 6 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PG4 Query on PG4 | J [auth B], L [auth B], P [auth C], V [auth D] | TETRAETHYLENE GLYCOL C8 H18 O5 UWHCKJMYHZGTIT-UHFFFAOYSA-N | |||
FLC Query on FLC | G [auth A], K [auth B], R [auth C], X [auth D] | CITRATE ANION C6 H5 O7 KRKNYBCHXYNGOX-UHFFFAOYSA-K | |||
PGE Query on PGE | E [auth A], F [auth A], W [auth D], Z [auth D] | TRIETHYLENE GLYCOL C6 H14 O4 ZIBGPFATKBEMQZ-UHFFFAOYSA-N | |||
PO4 Query on PO4 | AA [auth D] H [auth A] I [auth A] M [auth B] N [auth B] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K | |||
EDO Query on EDO | Q [auth C], Y [auth D] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
CL Query on CL | O [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B, C, D | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 126.353 | α = 90 |
b = 126.353 | β = 90 |
c = 199.064 | γ = 90 |
Software Name | Purpose |
---|---|
SBC-Collect | data collection |
HKL-3000 | phasing |
PHENIX | model building |
SHELX | model building |
ARP/wARP | model building |
MLPHARE | phasing |
REFMAC | refinement |
HKL-3000 | data reduction |
HKL-3000 | data scaling |
PHENIX | phasing |
SHELX | phasing |