3QZ6

The crystal structure of HpcH/HpaI aldolase from Desulfitobacterium hafniense DCB-2


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.172
  • R-Value Work: 0.152

Literature

Macromolecules
Sequence Display for 3QZ6

Classification: LYASE

Total Structure Weight: 29155.89

Macromolecule Entities
Molecule Chains Length Organism Details
HpcH/HpaI aldolase A 261 Desulfitobacterium hafniense Gene Name(s): Dhaf_2073
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.172
  • R-Value Work: 0.152
  • Space Group: H 3 2

Unit Cell:

Length (Å) Angle (°)
a = 131.53 α = 90.00
b = 131.53 β = 90.00
c = 176.36 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-03-04
  • Released Date: 2011-03-16
  • Deposition author(s): Tan, K., Chhor, G., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4