3QWD

Crystal structure of ClpP from Staphylococcus aureus

Structural Biology Knowledgebase: 3QWD SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.226
  • R-Value Work: 0.208

Literature

Macromolecules
Sequence Display for 3QWD

Classification: Hydrolase

Total Structure Weight: 316352.09

Macromolecule Entities
Molecule Chains Length Organism Details
ATP-dependent Clp protease proteolytic subunit A, B, C..., D, E, F, G, H, I, J, K, L, M, NA, B, C, D, E, F, G, H, I, J, K, L, M, N 203 Staphylococcus aureus EC#: 3.4.21.92 IUBMB
Gene Name(s): clpP SAOUHSC_00790
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CL
Query on CL

A, B, C, D, L, M CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.226
  • R-Value Work: 0.208
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 172.05 α = 90.00
b = 177.97 β = 90.00
c = 100.28 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-02-28
  • Released Date: 2011-05-18
  • Deposition author(s): Geiger, S.R., Boettcher, T., Sieber, S.A., Cramer, P.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4