3QO6

Crystal structure analysis of the plant protease Deg1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.215

Literature

Macromolecules
Sequence Display for 3QO6

Classification: PHOTOSYNTHESIS

Total Structure Weight: 112763.52

Macromolecule Entities
Molecule Chains Length Organism Details
Protease Do-like 1, chloroplastic A, B, C 348 Arabidopsis thaliana EC#: 3.4.21 IUBMB
Gene Name(s): DEGP1 DEG1 DEGP At3g27925 K16N12.18
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
peptide D 7 Unidentified
peptide E, H, I 4 Unidentified
peptide F 5 Unidentified
peptide G 3 Unidentified

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
UNK
Query on UNK
D, E, F, G, H, I L-PEPTIDE LINKING C4 H9 N O2 --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.215
  • Space Group: P 61 2 2

Unit Cell:

Length (Å) Angle (°)
a = 126.14 α = 90.00
b = 126.14 β = 90.00
c = 328.30 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-02-09
  • Released Date: 2011-05-04
  • Deposition author(s): Clausen, T.

Revision History

  • 2012-09-05
    Type: Biological assembly | Details: --
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4