3Q12

Pantoate-beta-alanine ligase from Yersinia pestis in complex with pantoate.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.58 Å
  • R-Value Free: 0.195
  • R-Value Work: 0.150

Literature

Macromolecules
Sequence Display for 3Q12

Classification: LIGASE

Total Structure Weight: 128983.36

Macromolecule Entities
Molecule Chains Length Organism Details
Pantoate--beta-alanine ligase A, B, C, D 287 Yersinia pestis EC#: 6.3.2.1 IUBMB
Gene Name(s): panC YPO3402 y0785 YP_0283
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PAF
Query on PAF

A, B, C, D PANTOATE
2,4-DIHYDROXY-3,3-DIMETHYL-BUTYRATE (Synonym)
C6 H11 O4
OTOIIPJYVQJATP-BYPYZUCNSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A, C CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 44.73 α = 100.67
b = 77.05 β = 95.33
c = 98.76 γ = 94.43

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-12-16
  • Released Date: 2011-02-02
  • Deposition author(s): Osipiuk, J., Maltseva, N., Kwon, K., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History

  • 2011-07-13
    Type: Version format compliance