3PLX

The crystal structure of aspartate alpha-decarboxylase from Campylobacter jejuni subsp. jejuni NCTC 11168


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.183
  • R-Value Work: 0.161

Literature

Macromolecules
Sequence Display for 3PLX

Classification: LYASE

Total Structure Weight: 14428.25

Macromolecule Entities
Molecule Chains Length Organism Details
Aspartate 1-decarboxylase A 27 Campylobacter jejuni EC#: 4.1.1.11 IUBMB
Fragment: UNP residues 1-24
Gene Name(s): panD Cj0296c
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Aspartate 1-decarboxylase B 102 Campylobacter jejuni EC#: 4.1.1.11 IUBMB
Fragment: UNP residues 25-126
Mutation: S25X
Gene Name(s): panD Cj0296c

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PEG
Query on PEG

B DI(HYDROXYETHYL)ETHER
C4 H10 O3
MTHSVFCYNBDYFN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ACT
Query on ACT

B ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
PYR
Query on PYR
B NON-POLYMER C3 H4 O3 --

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 82.10 α = 90.00
b = 82.10 β = 90.00
c = 95.38 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-11-15
  • Released Date: 2010-12-08
  • Deposition author(s): Tan, K., Gu, M., Peterson, S., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History

  • Version 1_0: 2010-12-08

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance