3PHU

OTU Domain of Crimean Congo Hemorrhagic Fever Virus

Structural Biology Knowledgebase: 3PHU SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.231
  • R-Value Work: 0.194

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3PHU

Classification: HYDROLASE

Total Structure Weight: 49611.31

Macromolecule Entities
Molecule Chains Length Organism Details
RNA-directed RNA polymerase L A, B 219 Crimean-congo hemorrhagic fever virus EC#: 2.7.7.48 IUBMB 3.4.19.12 IUBMB
Fragment: UNP residues 1-217
Gene Name(s): L
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
CSD
Query on CSD
A, B L-PEPTIDE LINKING C3 H7 N O4 S CYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.231
  • R-Value Work: 0.194
  • Space Group: P 32 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 115.99 α = 90.00
b = 115.99 β = 90.00
c = 94.17 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-11-04
  • Released Date: 2011-02-02
  • Deposition author(s): Akutsu, M., Ye, Y., Virdee, S., Komander, D.

Revision History

  • 2014-11-12
    Type: Polymer description | Details: --
  • 2014-08-06
    Type: Citation | Details: --
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4