3OQM

structure of ccpa-hpr-ser46p-ackA2 complex

Structural Biology Knowledgebase: 3OQM SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.96 Å
  • R-Value Free: 0.271
  • R-Value Work: 0.216

Literature

Macromolecules
Sequence Display for 3OQM

Classification: TRANSCRIPTION / TRANSFERASE / DNA

Total Structure Weight: 103920.93


Macromolecule Entities
Molecule Chains Length Organism Details
Catabolite control protein A A, C 339 Bacillus subtilis Gene Name(s): ccpA alsA amyR graR BSU29740
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Phosphocarrier protein HPr D, S 87 Bacillus subtilis EC#: 2.7.11 IUBMB
Gene Name(s): ptsH BSU13900
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*TP*TP*GP*TP*AP*AP*GP*CP*GP*TP*TP*AP*TP*CP*AP*A)-3' E 16 Bacillus subtilis
5'-D(*TP*TP*GP*AP*TP*AP*AP*CP*GP*CP*TP*TP*AP*CP*AP*A)-3' B 16 Bacillus subtilis

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, C SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
SEP
Query on SEP
D, S L-PEPTIDE LINKING C3 H8 N O6 P SER

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.96 Å
  • R-Value Free: 0.271
  • R-Value Work: 0.216
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 74.24 α = 90.00
b = 103.54 β = 90.00
c = 176.65 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-09-03
  • Released Date: 2010-12-08
  • Deposition author(s): Schumacher, M.A., Sprehe, M., Bartholomae, M., Hillen, W., Brennan, R.G.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4