3O6V

Crystal structure of Uridine Phosphorylase from Vibrio cholerae O1 biovar El Tor


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.178
  • R-Value Work: 0.148

Literature

Macromolecules
Sequence Display for 3O6V

Classification: TRANSFERASE

Total Structure Weight: 56160.17

Macromolecule Entities
Molecule Chains Length Organism Details
Uridine phosphorylase A, B 261 Vibrio cholerae EC#: 2.4.2.3 IUBMB
Gene Name(s): VC_1034
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A, B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
FMT
Query on FMT

B FORMIC ACID
C H2 O2
BDAGIHXWWSANSR-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 93.07 α = 90.00
b = 93.07 β = 90.00
c = 155.57 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-07-29
  • Released Date: 2010-10-13
  • Deposition author(s): Maltseva, N., Kim, Y., Hasseman, J., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History

  • 2011-07-13
    Type: Version format compliance