3O2R

Structural flexibility in region involved in dimer formation of nuclease domain of Ribonuclase III (rnc) from Campylobacter jejuni


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.25 Å
  • R-Value Free: 0.168
  • R-Value Work: 0.133

Literature

Macromolecules
Sequence Display for 3O2R

Classification: HYDROLASE

Total Structure Weight: 76715.00

Macromolecule Entities
Molecule Chains Length Organism Details
Ribonuclease III A, C 170 Campylobacter jejuni EC#: 3.1.26.3 IUBMB
Gene Name(s): rnc Cj1635c
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Ribonuclease III B, D 170 Campylobacter jejuni EC#: 3.1.26.3 IUBMB
Mutation: K31X
Gene Name(s): rnc Cj1635c

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CL
Query on CL

A, B, C, D CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MLZ
Query on MLZ
B, D L-PEPTIDE LINKING C7 H16 N2 O2 LYS

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 38.45 α = 90.00
b = 61.55 β = 90.09
c = 118.09 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-07-22
  • Released Date: 2010-08-04
  • Deposition author(s): Minasov, G., Halavaty, A., Shuvalova, L., Dubrovska, I., Winsor, J., Papazisi, L., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History

  • Version 1_0: 2010-08-04

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance

  • Version 1_2: 2012-05-30

    Type: Database references

  • Version 1_3: 2017-11-08

    Type: Refinement description