3O2F

Structure of the N-domain of GRP94 bound to the HSP90 inhibitor PU-H54


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.234

Literature

Macromolecules
Sequence Display for 3O2F

Classification: chaperone / inhibitor

Total Structure Weight: 54035.38

Macromolecule Entities
Molecule Chains Length Organism Details
Endoplasmin A, B 236 Canis lupus Fragment: UNP Residues 69-286, 328-337
Gene Name(s): HSP90B1 Gene View GRP94 TRA1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
P54
Query on P54

A, B 8-[(2,4-dimethylphenyl)sulfanyl]-3-pent-4- yn-1-yl-3H-purin-6-amine
C18 H19 N5 S
IIQUFGUOGYICIJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
IPA
Query on IPA

A ISOPROPYL ALCOHOL
2-PROPANOL (Synonym)
C3 H8 O
KFZMGEQAYNKOFK-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.234
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 60.96 α = 90.00
b = 65.69 β = 98.13
c = 85.45 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-07-22
  • Released Date: 2011-10-05
  • Deposition author(s): Seidler, P.M., Gewirth, D.T.

Revision History

  • 2013-09-11
    Type: Database references
  • 2013-11-20
    Type: Database references
  • 2017-08-23
    Type: Refinement description, Source and taxonomy