Structure of a putative nucleotide phosphatase from Saccharomyces cerevisiae
Brown, G., Evdokimova, E., Kudritska, M., Dong, A., Yang, C., Singer, A.U., Edwards, A.M., Savchenko, A., Yakunin, A.F.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
putative nucleotide phosphatase | 282 | Saccharomyces cerevisiae S288C | Mutation(s): 0  Gene Names: SDT1, SSM1, YGL224C EC: 3.1.3.5 | ||
UniProt | |||||
Find proteins for P53078 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore P53078  Go to UniProtKB:  P53078 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P53078 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PEG Query on PEG | G [auth A] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N | |||
EDO Query on EDO | B [auth A], C [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
CL Query on CL | E [auth A], F [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M | |||
NA Query on NA | D [auth A] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 58.474 | α = 90 |
b = 64.664 | β = 90 |
c = 67.708 | γ = 90 |
Software Name | Purpose |
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CrystalClear | data collection |
SHELXCD | phasing |
REFMAC | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |