3NJP

The Extracellular and Transmembrane Domain Interfaces in Epidermal Growth Factor Receptor Signaling


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.3 Å
  • R-Value Free: 0.298
  • R-Value Work: 0.263

Literature

Macromolecules
Sequence Display for 3NJP

Classification: TRANSFERASE

Total Structure Weight: 151812.47

Macromolecule Entities
Molecule Chains Length Organism Details
Epidermal growth factor receptor A, B 614 Homo sapiens EC#: 2.7.10.1 IUBMB
Mutation: N516K
Gene Name(s): EGFR Gene View ERBB ERBB1 HER1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Epidermal growth factor C, D 47 Homo sapiens Gene Name(s): EGF Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
2PE
Query on 2PE

B, D NONAETHYLENE GLYCOL
C18 H38 O10
YZUUTMGDONTGTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NAG
Query on NAG

A, B N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.3 Å
  • R-Value Free: 0.298
  • R-Value Work: 0.263
  • Space Group: P 31 2 1

Unit Cell:

Length (Å) Angle (°)
a = 220.17 α = 90.00
b = 220.17 β = 90.00
c = 113.12 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-06-17
  • Released Date: 2010-10-13
  • Deposition author(s): Lu, C., Mi, L.-Z., Grey, M.J., Zhu, J., Graef, E., Yokoyama, S., Springer, T.A.

Revision History

  • 2011-07-13
    Type: Version format compliance