Crystal structure of tetrameric pyridoxal 4-dehydrogenase from Mesorhizobium loti
Chu, H.N., Kobayashi, J., Yoshikane, Y., Mikami, B., Yagi, T.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
3-oxoacyl-(Acyl-carrier protein) reductase | 247 | Mesorhizobium loti | Mutation(s): 0  Gene Names: mlr6807, pldh-t EC: 1.1.1.107 | ||
UniProt | |||||
Find proteins for Q988B7 (Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099)) Explore Q988B7  Go to UniProtKB:  Q988B7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q988B7 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAD Query on NAD | E [auth A], F [auth B], G [auth C], H [auth D] | NICOTINAMIDE-ADENINE-DINUCLEOTIDE C21 H27 N7 O14 P2 BAWFJGJZGIEFAR-NNYOXOHSSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B, C, D | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
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a = 86.203 | α = 90 |
b = 51.109 | β = 89.36 |
c = 91.732 | γ = 90 |
Software Name | Purpose |
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HKL-2000 | data collection |
PHENIX | refinement |