3NB3

The host outer membrane proteins OmpA and OmpC are packed at specific sites in the Shigella phage Sf6 virion as structural components


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 19.0 Å
  • Aggregation State: Particle
  • Specimen Type: Vitreous Ice (cryo Em)
  • Reconstruction Method: Single Particle

Literature

Macromolecules
Sequence Display for 3NB3

Classification: VIRUS

Total Structure Weight: 150154.27

Macromolecule Entities
Molecule Chains Length Organism Details
Outer membrane protein A A, B, C 346 Escherichia coli Fragment: outer membrane protein A
Mutation: Q34K, K107Y
Gene Name(s): ompA con tolG tut b0957 JW0940
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Outer membrane protein C D 346 Escherichia coli Fragment: outer membrane protein C
Gene Name(s): ompC meoA par b2215 JW2203
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: inferred by homology | Group: BETA-BARREL

Subgroup Name: Beta-Barrel Membrane Proteins: Porins and Relatives

Protein Name: OmpC Osmoporin



Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 19.0 Å
  • Aggregation State: Particle
  • Specimen Type: Vitreous Ice (cryo Em)
  • Reconstruction Method: Single Particle

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-06-02
  • Released Date: 2011-02-16
  • Deposition author(s): Zhao, H., Sequeira, R.D., Galeva, N.A., Tang, L.

Revision History

  • 2016-11-09
    Type: Other | Details: Corrected scale records
  • 2012-04-25
    Type: Other | Details: Set CRYST1 record to electron microscopy values
  • 2012-04-25
    Type: Atom occupancy | Details: Chain C on 2-fold icosahedral axis
  • 2012-04-25
    Type: Source and taxonomy | Details: Fixed source names
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4