Crystal structure of Akt-1-inhibitor complexes
3MV5
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase
    Structure Weight: 41003.94
    Molecule: v-akt murine thymoma viral oncogene homolog 1 (AKT1)
    Polymer: 1 Type: protein Length: 342
    Chains: A
    EC#: 2.7.11.1   
    Fragment: Kinase Domain
    Mutation: S473D
    Organism: Homo sapiens
    Gene Names: PKB RAC Gene View for AKT1
    UniProtKB: Search PDB | P31749   Protein Feature View
    Molecule: GSK3-beta peptide
    Polymer: 2 Type: protein Length: 10
    Chains: C
    EC#: 2.7.11.26   
    Fragment: 10 residue peptide from GSK3-b (Residues 3-12)
    Organism: Homo sapiens
    Gene Name: Gene View for GSK3B
    UniProtKB: Search PDB | P49841   Protein Feature View
     
  •   Structure Validation Hide

    View the full validation report  

     

  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Spodoptera frugiperda  
    Polymer: 2
    Scientific Name: Synthetic construct (Homo sapiens)   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    3CQU    
    3CQW    
    3MVH    
    3MVJ    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    MN
    Search 
    Download 
    MN Mn
    MANGANESE (II) ION
    XFE
    Search 
    Download 
    XFE C11 H15 N5
    (3R)-1-(5-methyl-7H-pyrrolo[2,3-d]pyrimidin- 4-yl)pyrrolidin-3-amine
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    XFE
    Search 
    Download 
    XFE
    IC50: 180 nM (99) - data from BindingDB  
    IC50: 180 nM - data from BindingMOAD  
    IC50: 180 nM - data from PDBbind  
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    TPO
    Search 
    TPO C4 H10 N O6 P THR lPeptideLinking
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
Downloadable viewers:
 
 
 
  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Pandit, J.

    Deposition:   2010-05-03
    Release:   2010-06-02
    Last Modified (REVDAT):   2011-03-30
     
  •   Revision History    Hide
    Mouse over text for details
    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.47
    R-Value: 0.205 (obs.)
    R-Free: 0.282
    Space Group: P 1 21 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 42.71 α = 90.00 
    b = 55.42 β = 104.00 
    c = 93.29 γ = 90.00