Crystal structure of deoxyuridine 5-triphosphate nucleotidohydrolase from Brucella melitensis, orthorhombic crystal form
Abendroth, J., Sankaran, T., Gardberg, A., Staker, B.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Deoxyuridine 5'-triphosphate nucleotidohydrolase | 178 | Brucella abortus 2308 | Mutation(s): 0  Gene Names: dut, BAB1_1687 EC: 3.6.1.23 | ||
UniProt | |||||
Find proteins for Q2YRG4 (Brucella abortus (strain 2308)) Explore Q2YRG4  Go to UniProtKB:  Q2YRG4 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q2YRG4 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | D [auth A] E [auth A] J [auth B] N [auth C] O [auth C] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
GOL Query on GOL | I [auth A], R [auth C] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
EDO Query on EDO | F [auth A] G [auth A] H [auth A] K [auth B] L [auth B] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 50.56 | α = 90 |
b = 95.89 | β = 90 |
c = 100.35 | γ = 90 |
Software Name | Purpose |
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BOS | data collection |
PHASER | phasing |
REFMAC | refinement |
XDS | data reduction |
XSCALE | data scaling |